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Automated final lesion segmentation in posterior circulation acute ischemic stroke using deep learning

  • Riaan Zoetmulder
  • , Praneeta R. Konduri
  • , Iris V. Obdeijn
  • , Efstratios Gavves
  • , Ivana Išgum
  • , Charles B.L.M. Majoie
  • , Diederik W.J. Dippel
  • , Yvo B.W.E.M. Roos
  • , Mayank Goyal
  • , Peter J. Mitchell
  • , Bruce C.V. Campbell
  • , Demetrius K. Lopes
  • , Gernot Reimann
  • , Tudor G. Jovin
  • , Jeffrey L. Saver
  • , Keith W. Muir
  • , Phil White
  • , Serge Bracard
  • , Bailiang Chen
  • , Scott Brown
  • Wouter J. Schonewille, Erik van der Hoeven, Volker Puetz, Henk A. Marquering*
*Corresponding author for this work
  • Amsterdam UMC
  • University of Amsterdam
  • University of Calgary
  • University of Melbourne
  • Rush University Medical Center (Chicago)
  • Klinikum Dortmund
  • Cooper University Health Care
  • David Geffen School of Medicine
  • University of Glasgow
  • Newcastle University
  • Newcastle upon Tyne Hospitals NHS Foundation Trust
  • CHU de Nancy
  • Altair Biostatistics (Minn.)
  • St. Antonius Ziekenhuis
  • Technische Universität Dresden

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)
184 Downloads (Pure)

Abstract

Final lesion volume (FLV) is a surrogate outcome measure in anterior circulation stroke (ACS). In posterior circulation stroke (PCS), this relation is plausibly understudied due to a lack of methods that automatically quantify FLV. The applicability of deep learning approaches to PCS is limited due to its lower incidence compared to ACS. We evaluated strategies to develop a convo-lutional neural network (CNN) for PCS lesion segmentation by using image data from both ACS and PCS patients. We included follow-up non-contrast computed tomography scans of 1018 patients with ACS and 107 patients with PCS. To assess whether an ACS lesion segmentation generalizes to PCS, a CNN was trained on ACS data (ACS-CNN). Second, to evaluate the performance of only including PCS patients, a CNN was trained on PCS data. Third, to evaluate the performance when combining the datasets, a CNN was trained on both datasets. Finally, to evaluate the performance of transfer learning, the ACS-CNN was fine-tuned using PCS patients. The transfer learning strategy outperformed the other strategies in volume agreement with an intra-class correlation of 0.88 (95% CI: 0.83–0.92) vs. 0.55 to 0.83 and a lesion detection rate of 87% vs. 41–77 for the other strategies. Hence, transfer learning improved the FLV quantification and detection rate of PCS lesions compared to the other strategies.

Original languageEnglish
Article number1621
Number of pages15
JournalDiagnostics
Volume11
Issue number9
DOIs
Publication statusPublished - 4 Sept 2021

Bibliographical note

Acknowledgments: We gratefully acknowledge the support of NVIDIA Corporation with the donation of the Quadro P6000 GPU used for this research.

Publisher Copyright:
© 2021 by the authors. Licensee MDPI, Basel, Switzerland.

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