Complete genome analysis of hepatitis C virus subtypes 6t and 6u

S (Suwanna) Noppornpanth, Y Poovorawan, TX Lien, Saskia Smits, Ab Osterhaus, Bart Haagmans

Research output: Contribution to journalArticleAcademicpeer-review

18 Citations (Scopus)

Abstract

Hepatitis C virus (HCV) genomes exhibit high nucleotide sequence diversity. In this study, we performed complete genome sequence analysis of 11 HCV genotype 6 samples from Vietnam and Thailand, We identified nine HCV complete genomes belonging to subtypes 6a. (D9), 6e (D42 and D88), 6f (TH52), 6i (TH24), 61 (D33), 6n (TH22 and TH31) and 6o (D85). Phylogenetic analysis of the core/E1 and NS5B regions from unclassified genotype 6 isolates from Asian immigrants in Canada revealed that two other viruses (D49 and D83) could be classified as novel candidates of HCV subtypes 6t and 6u.
Original languageUndefined/Unknown
Pages (from-to)1276-1281
Number of pages6
JournalJournal of General Virology
Volume89
DOIs
Publication statusPublished - 2008

Research programs

  • EMC MM-04-27-01

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