GeneE: Gene and protein query expansion with disambiguation

Martijn Schuemie; Ning Kang; ML Hekkelman; Jan Kors

doi:10.1093/bioinformatics/btp597

GeneE: Gene and protein query expansion with disambiguation

Martijn Schuemie, Ning Kang, ML Hekkelman, Jan Kors

Medical Informatics

Research output: Contribution to journal › Article › Academic › peer-review

3 Citations (Scopus)

Abstract

When referring to genes, authors often use synonyms instead of the official gene symbols. In order to accurately retrieve as many relevant documents as possible, we have developed GeneE, a web application that expands a gene query to include all known synonyms, and adds disambiguation information for ambiguous terms, before forwarding the query to either PubMed, Google or Jane. The query expansion algorithm is also available as a web service.

Original language	Undefined/Unknown
Pages (from-to)	147-148
Number of pages	2
Journal	Bioinformatics
Volume	26
Issue number	1
DOIs	https://doi.org/10.1093/bioinformatics/btp597
Publication status	Published - 2010

Research programs

EMC NIHES-03-77-01

Access to Document

10.1093/bioinformatics/btp597

http://hdl.handle.net/1765/24634

Cite this

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