Multi-ancestry genome-wide association analyses improve resolution of genes and pathways influencing lung function and chronic obstructive pulmonary disease risk

  • Nick Shrine*
  • , Abril G. Izquierdo
  • , China Kadoorie Biobank Collaborative Group
  • , Qatar Genome Program Research (QGPR) Consortium
  • , Jing Chen
  • , Richard Packer
  • , Robert J. Hall
  • , Anna L. Guyatt
  • , Chiara Batini
  • , Rebecca J. Thompson
  • , Chandan Pavuluri
  • , Vidhi Malik
  • , Brian D. Hobbs
  • , Matthew Moll
  • , Wonji Kim
  • , Ruth Tal-Singer
  • , Per Bakke
  • , Katherine A. Fawcett
  • , Catherine John
  • , Kayesha Coley
  • Noemi Nicole Piga, Alfred Pozarickij, Kuang Lin, Iona Y. Millwood, Zhengming Chen, Liming Li, Sara R.A. Wijnant, Lies Lahousse, Guy Brusselle, Andre G. Uitterlinden, Ani Manichaikul, Elizabeth C. Oelsner, Stephen S. Rich, R. Graham Barr, Shona M. Kerr, Veronique Vitart, Michael R. Brown, Matthias Wielscher, Medea Imboden, Ayoung Jeong, Traci M. Bartz, Sina A. Gharib, Claudia Flexeder, Stefan Karrasch, Christian Gieger, Annette Peters, Beate Stubbe, Xiaowei Hu, Victor E. Ortega, Deborah A. Meyers, Jing Hua Zhao, Josée Dupuis
*Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

102 Citations (Scopus)
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Abstract

Lung-function impairment underlies chronic obstructive pulmonary disease (COPD) and predicts mortality. In the largest multi-ancestry genome-wide association meta-analysis of lung function to date, comprising 580,869 participants, we identified 1,020 independent association signals implicating 559 genes supported by ≥2 criteria from a systematic variant-to-gene mapping framework. These genes were enriched in 29 pathways. Individual variants showed heterogeneity across ancestries, age and smoking groups, and collectively as a genetic risk score showed strong association with COPD across ancestry groups. We undertook phenome-wide association studies for selected associated variants as well as trait and pathway-specific genetic risk scores to infer possible consequences of intervening in pathways underlying lung function. We highlight new putative causal variants, genes, proteins and pathways, including those targeted by existing drugs. These findings bring us closer to understanding the mechanisms underlying lung function and COPD, and should inform functional genomics experiments and potentially future COPD therapies.

Original languageEnglish
Pages (from-to)410-422
Number of pages13
JournalNature Genetics
Volume55
Issue number3
DOIs
Publication statusPublished - 1 Mar 2023

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© 2023. The Author(s).

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