Parallel sequencing lives, or what makes large sequencing projects successful

Javier Quilez; Enrique Vidal; François Le Dily; François Serra; Yasmina Cuartero; Ralph Stadhouders; Thomas Graf; Marc A. Marti-Renom; Miguel Beato; Guillaume Filion

doi:10.1093/gigascience/gix100

Parallel sequencing lives, or what makes large sequencing projects successful

Javier Quilez^*, Enrique Vidal, François Le Dily, François Serra, Yasmina Cuartero, Ralph Stadhouders, Thomas Graf, Marc A. Marti-Renom, Miguel Beato, Guillaume Filion

^*Corresponding author for this work

Pulmonary Medicine

Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review

3 Citations (Scopus)

2 Downloads (Pure)

Abstract

T47D rep2 and b1913e6c1 51720e9cf were 2 Hi-C samples. They were born and processed at the same time, yet their fates were very different. The life of b1913e6c1 51720e9cf was simple and fruitful, while that of T47D rep2 was full of accidents and sorrow. At the heart of these differences lies the fact that b1913e6c1 51720e9cf was born under a lab culture of Documentation, Automation, Traceability, and Autonomy and compliance with the FAIR Principles. Their lives are a lesson for those who wish to embark on the journey of managing high-throughput sequencing data.

Original language	English
Article number	gix100
Journal	GigaScience
Volume	6
Issue number	11
DOIs	https://doi.org/10.1093/gigascience/gix100
Publication status	Published - 1 Nov 2017

Bibliographical note

Funding Information:
We received funding from the European Research Council under the European Union’s Seventh Framework Programme (FP7/2007–2013)/ERC Synergy grant agreement 609 989 (4DGenome). The content of this manuscript reflects only the authors’ views, and the Union is not liable for any use that may be made of the information contained therein. We acknowledge support of the Spanish Ministry of Economy and Competitiveness, “Centro de Excelencia Severo Ochoa 2013–2017,” and Plan Nacional (SAF2016–75 006-P), as well as support of the CERCA Programme/Generalitat de Catalunya. R.S. was supported by an EMBO Long-term Fellowship (ALTF 1201–2014) and a Marie Curie Individual Fellowship (H2020-MSCA-IF-2014).

Publisher Copyright:
© The Author 2017.

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Parallel sequencing lives, or what makes large sequencing projects successfulFinal published version, 536 KBLicence: CC BY

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title = "Parallel sequencing lives, or what makes large sequencing projects successful",

abstract = "T47D rep2 and b1913e6c1 51720e9cf were 2 Hi-C samples. They were born and processed at the same time, yet their fates were very different. The life of b1913e6c1 51720e9cf was simple and fruitful, while that of T47D rep2 was full of accidents and sorrow. At the heart of these differences lies the fact that b1913e6c1 51720e9cf was born under a lab culture of Documentation, Automation, Traceability, and Autonomy and compliance with the FAIR Principles. Their lives are a lesson for those who wish to embark on the journey of managing high-throughput sequencing data.",

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AU - Vidal, Enrique

AU - Le Dily, François

AU - Serra, François

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AU - Stadhouders, Ralph

AU - Graf, Thomas

AU - Marti-Renom, Marc A.

AU - Beato, Miguel

AU - Filion, Guillaume

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Parallel sequencing lives, or what makes large sequencing projects successful

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