Relationship between molecular pathogen detection and clinical disease in febrile children across Europe: a multicentre, prospective observational study

Priyen Shah, Marie Voice, The PERFORM consortium (Personalized Risk assessment in febrile children to optimize Real-life Management across the European Union), Leonides Calvo-Bado, Irene Rivero-Calle, Sophie Morris, Ruud Nijman, Claire Broderick, Tisham De, Irini Eleftheriou, Rachel Galassini, Aakash Khanijau, Laura Kolberg, Mojca Kolnik, Aleksandra Rudzate, Manfred Sagmeister, Nina Schweintzger, Fatou Secka, Clare Thakker, Fabian van der VeldenClementien Vermont, Katarina Vincek, Philipp K.A. Agyeman, Aubrey J. Cunnington, Ronald De Groot, Marieke Emonts, Katy Fidler, Taco Kuijpers, Marine Mommert-Tripon, Karen Brengel-Pesce, Francois Mallet, Henriette Moll, Stéphane Paulus, Marko Pokorn, Andrew Pollard, Michiel van der Flier, Dorine M. Borensztajn, Nienke N. Hagedoorn, Joany Zachariasse, W. Dik, Martin Stocker, Esther Willems, L. De Haan, C. Neeleman, G. A. Tramper-Stranders, Bryan Baas, Lieke Kloosterhuis, Wilma Oosthoek, Gabriella De Vries, J. M. van den Berg, A. M. Barendregt

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Abstract

Background: The PERFORM study aimed to understand causes of febrile childhood illness by comparing molecular pathogen detection with current clinical practice. Methods: Febrile children and controls were recruited on presentation to hospital in 9 European countries 2016–2020. Each child was assigned a standardized diagnostic category based on retrospective review of local clinical and microbiological data. Subsequently, centralised molecular tests (CMTs) for 19 respiratory and 27 blood pathogens were performed. Findings: Of 4611 febrile children, 643 (14%) were classified as definite bacterial infection (DB), 491 (11%) as definite viral infection (DV), and 3477 (75%) had uncertain aetiology. 1061 controls without infection were recruited. CMTs detected blood bacteria more frequently in DB than DV cases for N. meningitidis (OR: 3.37, 95% CI: 1.92–5.99), S. pneumoniae (OR: 3.89, 95% CI: 2.07–7.59), Group A streptococcus (OR 2.73, 95% CI 1.13–6.09) and E. coli (OR 2.7, 95% CI 1.02–6.71). Respiratory viruses were more common in febrile children than controls, but only influenza A (OR 0.24, 95% CI 0.11–0.46), influenza B (OR 0.12, 95% CI 0.02–0.37) and RSV (OR 0.16, 95% CI: 0.06–0.36) were less common in DB than DV cases. Of 16 blood viruses, enterovirus (OR 0.43, 95% CI 0.23–0.72) and EBV (OR 0.71, 95% CI 0.56–0.90) were detected less often in DB than DV cases. Combined local diagnostics and CMTs respectively detected blood viruses and respiratory viruses in 360 (56%) and 161 (25%) of DB cases, and virus detection ruled-out bacterial infection poorly, with predictive values of 0.64 and 0.68 respectively. Interpretation: Most febrile children cannot be conclusively defined as having bacterial or viral infection when molecular tests supplement conventional approaches. Viruses are detected in most patients with bacterial infections, and the clinical value of individual pathogen detection in determining treatment is low. New approaches are needed to help determine which febrile children require antibiotics. Funding: EU Horizon 2020 grant 668303.

Original languageEnglish
Article number100682
JournalThe Lancet Regional Health - Europe
Volume32
DOIs
Publication statusPublished - Sept 2023

Bibliographical note

Acknowledgements
We are grateful to all patients and families that contributed towards this
study. This project received funding under the European Union’s Horizon 2020 Research and Innovation program under grant agreement
number 668303. PERFORM consortium activities included obtaining
study funding, patient recruitment, clinical data collection and entry,
assignment of patient phenotypes, processing and storage of research
samples used in this analysis, and molecular pathogen testing.

Publisher Copyright: © 2023 The Authors

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